Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7418

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7417: 15785 - K03353 APC6, CDC16 anaphase-promoting complex subunit 6, at 230745 to 233451 15785 mRNA_7418: 15786 - Hypothetical Protein, at 234371 to 235150 15786 mRNA_7419: 15787 - Hypothetical Protein, at 236093 to 236724 15787

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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233,445 + -3.2
233,723 + -1.8
233,741 - -0.4
233,817 - -0.4
233,817 + -0.4
233,828 - -3.5
233,855 + -0.7
234,012 + -0.9
234,158 + -1.1
234,254 - -0.0
234,280 + -0.6
234,283 + -1.9
234,300 - -2.1
234,305 + -3.3
234,321 + -2.1
234,326 + -3.8
234,342 - -0.6
234,344 + -0.5
234,369 + -2.9
234,456 - 15786 mRNA_7418 0.11 -2.7
234,460 + 15786 mRNA_7418 0.11 -2.9
234,465 - 15786 mRNA_7418 0.12 -3.2
234,473 + 15786 mRNA_7418 0.13 -2.2
234,477 + 15786 mRNA_7418 0.14 0.1
234,492 + 15786 mRNA_7418 0.16 -1.3
234,504 + 15786 mRNA_7418 0.17 -2.0
234,507 + 15786 mRNA_7418 0.17 -2.2
234,548 - 15786 mRNA_7418 0.23 0.9
234,550 + 15786 mRNA_7418 0.23 -0.0
234,551 + 15786 mRNA_7418 0.23 -1.6
234,579 - 15786 mRNA_7418 0.27 -1.4
234,613 - 15786 mRNA_7418 0.31 -4.7
234,620 + 15786 mRNA_7418 0.32 -1.6
234,631 + 15786 mRNA_7418 0.33 -0.8
234,633 - 15786 mRNA_7418 0.34 -0.7
234,634 + 15786 mRNA_7418 0.34 -0.6
234,639 + 15786 mRNA_7418 0.34 -1.9
234,639 + 15786 mRNA_7418 0.34 -1.5
234,663 - 15786 mRNA_7418 0.37 -0.6
234,699 + 15786 mRNA_7418 0.42 0.7
234,788 - 15786 mRNA_7418 0.53 -0.6
234,798 - 15786 mRNA_7418 0.55 -2.0
234,798 + 15786 mRNA_7418 0.55 -1.5
234,799 + 15786 mRNA_7418 0.55 -0.9
234,806 - 15786 mRNA_7418 0.56 -1.7
234,811 + 15786 mRNA_7418 0.56 -2.3
234,811 + 15786 mRNA_7418 0.56 -0.6
234,814 - 15786 mRNA_7418 0.57 -0.3
234,814 + 15786 mRNA_7418 0.57 0.9
234,821 + 15786 mRNA_7418 0.58 -0.5
234,845 - 15786 mRNA_7418 0.61 1.1
234,935 - 15786 mRNA_7418 0.72 -3.3
234,965 + 15786 mRNA_7418 0.76 -1.1
235,109 - 0.2
235,115 - -1.0
235,121 + 0.6
235,271 - -0.8
235,280 + -3.1
235,545 - 1.2
235,701 + -2.1
235,824 - -1.6
235,989 + 0.1