Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7386

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7385: 15753 - ProSiteProfiles-Ubiquitin-interacting motif (UIM) repeat profile.-PS50330, at 154422 to 157963 15753 mRNA_7386: 15754 - HMMPfam-F-box-like-PF12937, at 158123 to 159294 15754 mRNA_7387: 15755 - Hypothetical Protein, at 159588 to 160374 15755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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157,199 + 15753 mRNA_7385 0.78 -0.4
157,295 - 15753 mRNA_7385 0.81 -0.4
157,296 + 15753 mRNA_7385 0.81 -1.2
157,487 + 15753 mRNA_7385 0.87 -1.1
157,652 + -1.5
157,742 - -0.5
157,862 - -1.6
158,223 - 1.7
158,329 + 15754 mRNA_7386 0.18 0.3
158,333 - 15754 mRNA_7386 0.18 -0.4
158,399 - 15754 mRNA_7386 0.24 -1.9
158,492 + 15754 mRNA_7386 0.31 -1.7
158,496 - 15754 mRNA_7386 0.32 -0.5
158,508 + 15754 mRNA_7386 0.33 -1.2
159,659 + -3.6
159,699 - 15755 mRNA_7387 0.14 -1.6
159,932 - 15755 mRNA_7387 0.44 -0.7