Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7372

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7371: 15739 - Hypothetical Protein, at 113683 to 115680 15739 mRNA_7372: 15740 - K03869 CUL3 cullin 3, at 116214 to 119420 15740 mRNA_7373: 15741 - HMMPfam-FAD binding domain-PF01494,PRINTS-Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature-PR00420,SUPERFAMILY--SSF51905, at 119953 to 122182 15741

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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115,380 - 15739 mRNA_7371 0.85 1.0
115,384 - 15739 mRNA_7371 0.85 -0.5
115,386 + 15739 mRNA_7371 0.85 -1.7
115,502 + -1.3
115,802 - -1.8
115,806 - -1.7
115,825 + -0.5
116,713 - 15740 mRNA_7372 0.16 0.0
117,011 - 15740 mRNA_7372 0.25 0.1
117,157 + 15740 mRNA_7372 0.29 -0.9
117,300 + 15740 mRNA_7372 0.34 -2.0
117,593 + 15740 mRNA_7372 0.43 -1.3
117,602 - 15740 mRNA_7372 0.43 -1.1
117,706 - 15740 mRNA_7372 0.47 -0.0
117,881 - 15740 mRNA_7372 0.52 -1.4
117,908 - 15740 mRNA_7372 0.53 -0.2
118,453 - 15740 mRNA_7372 0.70 -1.7
118,483 - 15740 mRNA_7372 0.71 -1.1
119,043 + 15740 mRNA_7372 0.88 -0.8
119,184 - -1.9
119,344 + 0.9
119,362 - -2.9
119,490 + -0.6
119,493 - -2.2
119,629 + -0.8
119,639 - -0.7
119,641 + -2.5
119,648 + -2.2
119,649 + -2.1
119,663 - -0.7
119,807 + 0.2
119,930 - -2.5
120,210 - 15741 mRNA_7373 0.12 0.1