Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7370

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111155 to 112314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112861 to 113422 15738 mRNA_7371: 15739 - Hypothetical Protein, at 113683 to 115680 15739

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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111,886 - 15737 mRNA_7369 0.63 0.2
112,057 - 15737 mRNA_7369 0.78 -4.0
112,217 - -1.1
112,221 + -1.6
112,231 + -1.3
112,232 - -1.5
112,234 + -3.3
112,243 + -1.4
112,359 + -4.0
112,364 - 0.2
112,368 + -0.7
112,370 + -0.2
112,374 + -1.1
112,382 + -2.5
112,394 + -0.8
112,399 + -2.3
113,297 - 15738 mRNA_7370 0.78 -0.9
113,415 - -1.7
113,851 - -0.4
113,987 + 15739 mRNA_7371 0.15 0.2
114,100 - 15739 mRNA_7371 0.21 -1.3
114,144 + 15739 mRNA_7371 0.23 -0.5
114,287 + 15739 mRNA_7371 0.30 -0.5