Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7369

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7368: 15736 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 107448 to 110616 15736 mRNA_7369: 15737 - KOG1203 Predicted dehydrogenase, at 111155 to 112314 15737 mRNA_7370: 15738 - HMMPfam-Oligomerisation domain-PF02410, at 112861 to 113422 15738

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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110,272 + 15736 mRNA_7368 0.89 -2.5
110,411 - -1.9
110,411 - -0.2
110,573 + -1.2
110,688 + -2.0
110,708 + 0.0
110,727 + -2.7
110,728 - -0.7
110,731 + -1.1
110,743 + -3.3
110,745 - -1.9
110,747 - -1.9
110,750 + -0.8
110,750 - -2.3
110,755 + 0.6
110,757 + 2.0
110,763 + -0.6
110,764 + -0.8
110,851 - -2.0
110,878 - -1.4
110,886 - -1.4
110,892 - -1.9
110,904 + -0.0
110,904 + -0.9
110,905 - 0.1
110,929 - -0.7
110,945 - 0.0
110,949 - -3.2
110,950 + -0.7
110,958 + -0.4
110,979 - -3.1
111,011 - -0.8
111,022 + -2.6
111,023 - -1.3
111,034 + 0.2
111,040 - -4.0
111,178 - -2.4
111,225 + -1.2
111,886 - 15737 mRNA_7369 0.63 0.2
112,057 - 15737 mRNA_7369 0.78 -4.0
112,217 - -1.1
112,221 + -1.6
112,231 + -1.3
112,232 - -1.5
112,234 + -3.3
112,243 + -1.4
112,359 + -4.0
112,364 - 0.2
112,368 + -0.7
112,370 + -0.2
112,374 + -1.1
112,382 + -2.5
112,394 + -0.8
112,399 + -2.3
113,297 - 15738 mRNA_7370 0.78 -0.9