Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7351

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7351: 15719 - BLAST unknown [Tremella fuciformis], at 71503 to 72321 15719

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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70,634 - 0.7
70,653 + -1.7
70,788 - -1.8
70,792 - -1.7
70,807 + -2.2
70,830 + -1.2
70,908 + -1.9
70,954 - -1.1
71,079 - 0.7
71,089 - -0.2
71,094 - 0.6
71,097 - 0.2
71,101 + 1.5
71,108 - -0.4
71,121 + -0.8
71,389 + -0.7
71,603 - 15719 mRNA_7351 0.12 0.4
71,715 - 15719 mRNA_7351 0.26 0.3
71,739 - 15719 mRNA_7351 0.29 -2.0
71,909 - 15719 mRNA_7351 0.50 -3.7
72,062 - 15719 mRNA_7351 0.68 -1.7
72,238 - 15719 mRNA_7351 0.90 -0.4
72,507 + -1.3
72,509 - -1.4
72,510 + 0.0
72,525 - -1.2
72,532 - -0.4
72,533 + 0.2
72,537 + -2.0
72,545 + 0.5
72,547 + -0.7
72,640 - -2.5
72,648 - -1.3
72,657 - -0.9
72,658 - -2.2
72,658 - -1.7
72,666 + -1.2
72,668 + -2.2
72,701 - -2.6
72,708 + 0.8
72,712 + -2.1
72,716 + -2.7
72,847 - -0.9
72,853 - 1.4
72,855 - -1.0
72,857 - -1.5
72,869 + -1.6
72,871 - -2.8
72,876 + -0.6
72,885 + 0.4
72,911 - -0.3
73,010 - -2.7
73,015 - -3.0
73,039 + -1.4
73,045 + 0.2
73,049 + -0.4
73,151 + -3.1
73,189 - -0.3
73,239 - -1.2