Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7337

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7336: 15704 - Hypothetical Protein, at 31786 to 32791 15704 mRNA_7337: 15705 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 33079 to 35089 15705 mRNA_7338: 15706 - K00451 HGD, hmgA homogentisate 1,2-dioxygenase, at 35529 to 37856 15706

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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32,270 - 15704 mRNA_7336 0.48 -2.6
32,426 - 15704 mRNA_7336 0.64 0.2
32,589 + 15704 mRNA_7336 0.80 -0.4
32,700 + -0.3
32,708 - -5.0
32,748 - -2.0
32,987 - -2.7
33,571 + 15705 mRNA_7337 0.24 -2.7
33,701 - 15705 mRNA_7337 0.31 -1.2
33,886 + 15705 mRNA_7337 0.40 0.9
34,444 + 15705 mRNA_7337 0.68 -2.0
34,447 + 15705 mRNA_7337 0.68 -2.7
34,493 - 15705 mRNA_7337 0.70 -3.0
34,604 + 15705 mRNA_7337 0.76 1.0
34,871 + 15705 mRNA_7337 0.89 -1.3
35,034 + -4.5
35,036 - -3.5
35,183 + -2.4
35,191 + -2.6
35,456 + -1.4
35,495 + -0.3
35,922 + 15706 mRNA_7338 0.17 -2.4
35,953 + 15706 mRNA_7338 0.18 -2.0