Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7334

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7333: 15701 - SUPERFAMILY--SSF52047, at 28402 to 29421 15701 mRNA_7334: 15702 - HMMPfam-RTA1 like protein-PF04479, at 29500 to 31086 15702 mRNA_7335: 15703 - Hypothetical Protein, at 31308 to 31781 15703 mRNA_7336: 15704 - Hypothetical Protein, at 31786 to 32791 15704

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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28,715 - 15701 mRNA_7333 0.31 -2.3
28,900 + 15701 mRNA_7333 0.49 -0.8
28,901 - 15701 mRNA_7333 0.49 -1.6
29,051 + 15701 mRNA_7333 0.64 0.3
29,314 - 15701 mRNA_7333 0.89 -1.7
29,371 - -0.2
29,516 - -2.1
29,620 - -0.0
29,620 + -1.0
29,664 - 15702 mRNA_7334 0.10 -2.6
29,702 - 15702 mRNA_7334 0.13 -3.2
29,913 - 15702 mRNA_7334 0.26 -2.1
29,970 + 15702 mRNA_7334 0.30 -1.9
30,341 - 15702 mRNA_7334 0.53 -2.4
30,512 - 15702 mRNA_7334 0.64 -0.4
30,819 + 15702 mRNA_7334 0.83 -2.0
30,820 - 15702 mRNA_7334 0.83 1.2
30,846 + 15702 mRNA_7334 0.85 -0.8
30,902 - 15702 mRNA_7334 0.88 -2.2
30,920 - 15702 mRNA_7334 0.89 -2.5
30,947 - -1.5
31,065 - -0.8
31,237 + -0.5
31,239 + -0.9
31,259 + -1.2
31,263 + 0.6
31,271 + -1.5
31,285 - -0.1
31,291 - 0.8
31,293 - 1.0
31,299 - -2.4
31,301 - -2.9
31,303 - -0.9
31,315 - -0.1
31,326 - 0.7
31,330 - -0.0
31,340 + -1.1
31,341 - -2.2
31,342 - -1.6
31,372 - 15703 mRNA_7335 0.14 -2.1
31,383 + 15703 mRNA_7335 0.16 -0.9
31,385 - 15703 mRNA_7335 0.16 -1.4
31,389 - 15703 mRNA_7335 0.17 -0.4
31,397 + 15703 mRNA_7335 0.19 0.5
31,410 + 15703 mRNA_7335 0.22 0.0
31,434 + 15703 mRNA_7335 0.27 -2.1
31,458 + 15703 mRNA_7335 0.32 0.8
31,532 - 15703 mRNA_7335 0.47 -1.0