Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7332

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7331: 15699 - KOG1666 V-SNARE, at 24685 to 25773 15699 mRNA_7332: 15700 - K05542 DUS1 tRNA-dihydrouridine synthase 1, at 26472 to 27994 15700 mRNA_7333: 15701 - SUPERFAMILY--SSF52047, at 28402 to 29421 15701

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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25,558 + 15699 mRNA_7331 0.80 -1.1
25,816 - -2.6
25,923 - 0.2
25,931 - -0.8
25,934 + -0.6
26,115 + -1.0
26,257 - -0.8
26,270 - -0.0
26,541 + -0.0
26,542 - -1.8
26,544 - -3.2
26,717 + 15700 mRNA_7332 0.16 -3.2
27,044 + 15700 mRNA_7332 0.38 -1.7
27,116 - 15700 mRNA_7332 0.42 0.2
27,291 - 15700 mRNA_7332 0.54 -1.8
27,576 + 15700 mRNA_7332 0.72 -1.7
27,627 - 15700 mRNA_7332 0.76 -1.6
27,726 - 15700 mRNA_7332 0.82 -2.5
27,732 + 15700 mRNA_7332 0.83 -3.1
27,878 + -2.0
28,011 + 0.1
28,056 - 0.5
28,056 - -3.3
28,314 - -2.5
28,314 - -1.7
28,315 + -1.0
28,319 + -0.8
28,459 + 0.5
28,468 + -2.1
28,471 + -2.3
28,715 - 15701 mRNA_7333 0.31 -2.3
28,900 + 15701 mRNA_7333 0.49 -0.8
28,901 - 15701 mRNA_7333 0.49 -1.6