Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7331

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7330: 15698 - KOG0409 Predicted dehydrogenase, at 22556 to 24304 15698 mRNA_7331: 15699 - KOG1666 V-SNARE, at 24685 to 25773 15699 mRNA_7332: 15700 - K05542 DUS1 tRNA-dihydrouridine synthase 1, at 26472 to 27994 15700

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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23,877 + 15698 mRNA_7330 0.76 -1.0
24,463 + -1.8
24,490 + -1.5
24,493 + -0.7
24,495 + 0.3
24,635 - -0.6
24,672 + -1.3
24,676 + -1.5
24,772 - -1.3
24,939 + 15699 mRNA_7331 0.23 0.7
25,082 + 15699 mRNA_7331 0.36 -2.2
25,245 + 15699 mRNA_7331 0.51 -1.9
25,558 + 15699 mRNA_7331 0.80 -1.1
25,816 - -2.6
25,923 - 0.2
25,931 - -0.8
25,934 + -0.6
26,115 + -1.0
26,257 - -0.8
26,270 - -0.0
26,541 + -0.0
26,542 - -1.8
26,544 - -3.2
26,717 + 15700 mRNA_7332 0.16 -3.2