Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7329

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7329: 15697 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 19651 to 22039 15697 mRNA_7330: 15698 - KOG0409 Predicted dehydrogenase, at 22556 to 24304 15698

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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18,813 + 1.1
19,048 - -0.1
19,062 - 1.5
19,122 + -0.8
19,182 - -3.0
19,219 - -1.1
19,227 + 0.0
19,227 + -0.0
19,228 - -1.7
19,336 - -0.7
19,338 - -0.8
19,343 + -0.1
19,356 - -1.5
19,369 - -1.5
19,503 + -2.1
19,843 - -0.6
19,890 - 15697 mRNA_7329 0.10 -0.2
19,953 + 15697 mRNA_7329 0.13 -1.9
19,962 + 15697 mRNA_7329 0.13 -0.8
20,120 + 15697 mRNA_7329 0.20 -1.2
20,214 - 15697 mRNA_7329 0.24 -1.2
20,226 + 15697 mRNA_7329 0.24 0.0
20,226 + 15697 mRNA_7329 0.24 -0.8
20,229 - 15697 mRNA_7329 0.24 -2.3
20,232 - 15697 mRNA_7329 0.24 -0.5
20,701 + 15697 mRNA_7329 0.44 -2.5
20,830 - 15697 mRNA_7329 0.49 0.2
21,159 - 15697 mRNA_7329 0.63 -1.2
21,279 - 15697 mRNA_7329 0.68 -1.1
21,687 + 15697 mRNA_7329 0.85 -1.0
21,838 - -1.1
21,990 + 0.2
21,996 - 0.5
22,283 - -2.1
22,425 - -1.9
22,446 - -3.9