Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7325

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7324: 15692 - K20967 MOCS1 GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase, at 8009 to 10735 15692 mRNA_7325: 15693 - K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase, at 10926 to 12277 15693 mRNA_7326: 15694 - K01969 E6.4.1.4B 3-methylcrotonyl-CoA carboxylase beta subunit, at 12485 to 14861 15694

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
10,155 - 15692 mRNA_7324 0.79 -2.8
10,487 - -2.6
10,512 + -1.4
10,628 + -3.0
10,746 + 0.4
10,770 + 0.1
11,170 - 15693 mRNA_7325 0.18 -3.3
11,306 - 15693 mRNA_7325 0.28 -0.1
11,501 - 15693 mRNA_7325 0.43 0.8
11,631 - 15693 mRNA_7325 0.52 -1.5
11,788 + 15693 mRNA_7325 0.64 -2.0
11,919 + 15693 mRNA_7325 0.73 -3.1
12,049 - 15693 mRNA_7325 0.83 -1.4
12,066 - 15693 mRNA_7325 0.84 0.1
12,198 - -0.5
12,204 - -1.8
12,223 + -0.4
12,348 + -1.1
12,348 - -1.6
12,349 + -0.8
12,355 - -0.7
12,358 + -1.2
12,360 + 1.3
12,366 - -3.5
12,406 - -0.6
12,528 - -2.3
12,547 - -1.4
13,043 - 15694 mRNA_7326 0.23 -1.5
13,147 - 15694 mRNA_7326 0.28 -4.2
13,160 + 15694 mRNA_7326 0.28 -1.9
13,270 + 15694 mRNA_7326 0.33 0.8