Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7324

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7323: 15691 - K10579 UBE2M, UBC12 ubiquitin-conjugating enzyme E2 M, at 6530 to 7758 15691 mRNA_7324: 15692 - K20967 MOCS1 GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase, at 8009 to 10735 15692 mRNA_7325: 15693 - K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase, at 10926 to 12277 15693

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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7,806 - -2.0
7,809 - -0.1
7,940 + -1.3
7,958 - -2.6
7,961 - -3.1
7,969 - 0.3
7,974 - -2.7
8,104 - 0.5
8,107 - -0.4
8,123 + -0.6
8,138 - -2.9
8,277 - -1.8
8,392 - 15692 mRNA_7324 0.14 -2.7
8,429 + 15692 mRNA_7324 0.15 -1.0
8,569 + 15692 mRNA_7324 0.21 -0.6
8,575 + 15692 mRNA_7324 0.21 -0.7
8,666 + 15692 mRNA_7324 0.24 -1.3
8,678 - 15692 mRNA_7324 0.25 -0.4
8,682 + 15692 mRNA_7324 0.25 -0.4
8,702 - 15692 mRNA_7324 0.25 0.7
8,818 + 15692 mRNA_7324 0.30 -2.1
8,862 - 15692 mRNA_7324 0.31 -2.3
9,008 + 15692 mRNA_7324 0.37 -2.7
9,029 - 15692 mRNA_7324 0.37 0.3
9,174 - 15692 mRNA_7324 0.43 0.3
9,375 - 15692 mRNA_7324 0.50 -0.3
9,441 - 15692 mRNA_7324 0.53 0.9
9,555 - 15692 mRNA_7324 0.57 -0.8
9,559 - 15692 mRNA_7324 0.57 0.6
9,709 - 15692 mRNA_7324 0.62 -0.5
9,858 - 15692 mRNA_7324 0.68 -2.8
9,865 + 15692 mRNA_7324 0.68 -1.8
10,155 - 15692 mRNA_7324 0.79 -2.8
10,487 - -2.6
10,512 + -1.4
10,628 + -3.0
10,746 + 0.4
10,770 + 0.1
11,170 - 15693 mRNA_7325 0.18 -3.3
11,306 - 15693 mRNA_7325 0.28 -0.1
11,501 - 15693 mRNA_7325 0.43 0.8
11,631 - 15693 mRNA_7325 0.52 -1.5