Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7321

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7320: 15688 - BLAST genomic scaffold, msy-sf-7 protein, putative [Rhizoct..., at 106 to 1532 15688 mRNA_7321: 15689 - KOG1339 Aspartyl protease, at 1943 to 3763 15689 mRNA_7322: 15690 - K14849 RRP1 ribosomal RNA-processing protein 1, at 4422 to 5823 15690

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
945 + 15688 mRNA_7320 0.59 -2.3
1,059 + 15688 mRNA_7320 0.67 -2.3
1,167 + 15688 mRNA_7320 0.74 -1.2
1,174 + 15688 mRNA_7320 0.75 0.6
1,182 - 15688 mRNA_7320 0.75 1.2
1,196 + 15688 mRNA_7320 0.76 -0.0
1,218 + 15688 mRNA_7320 0.78 -2.1
1,258 + 15688 mRNA_7320 0.81 -0.1
1,326 - 15688 mRNA_7320 0.85 -4.6
1,360 + 15688 mRNA_7320 0.88 -3.2
1,366 + 15688 mRNA_7320 0.88 0.0
1,497 - -0.2
1,518 + -0.2
1,582 + -1.3
1,666 - -2.7
1,675 + -3.1
1,789 - -1.0
1,907 + -1.4
1,929 + -1.5
1,948 + -3.0
2,105 - -0.8
2,297 - 15689 mRNA_7321 0.19 -0.7
2,508 - 15689 mRNA_7321 0.31 -2.8
2,521 + 15689 mRNA_7321 0.32 -2.5
2,526 + 15689 mRNA_7321 0.32 -0.2
2,529 - 15689 mRNA_7321 0.32 -1.2
2,529 - 15689 mRNA_7321 0.32 -1.2
2,535 + 15689 mRNA_7321 0.33 -1.8
2,537 + 15689 mRNA_7321 0.33 -1.2
2,546 + 15689 mRNA_7321 0.33 -1.4
2,548 - 15689 mRNA_7321 0.33 -2.4
2,680 + 15689 mRNA_7321 0.40 -3.3
2,682 - 15689 mRNA_7321 0.41 -1.9
2,707 + 15689 mRNA_7321 0.42 -2.0
2,723 - 15689 mRNA_7321 0.43 -1.6
2,723 + 15689 mRNA_7321 0.43 0.1
2,787 - 15689 mRNA_7321 0.46 -0.5
2,811 - 15689 mRNA_7321 0.48 -0.5
2,857 + 15689 mRNA_7321 0.50 -0.2
2,870 + 15689 mRNA_7321 0.51 -0.7
2,884 + 15689 mRNA_7321 0.52 -0.2
2,924 + 15689 mRNA_7321 0.54 0.1
2,973 + 15689 mRNA_7321 0.57 1.6
2,988 + 15689 mRNA_7321 0.57 0.3
2,988 + 15689 mRNA_7321 0.57 -0.9
2,988 - 15689 mRNA_7321 0.57 -0.7
2,991 - 15689 mRNA_7321 0.58 -1.5
3,008 + 15689 mRNA_7321 0.58 -1.9
3,020 + 15689 mRNA_7321 0.59 -1.2
3,146 + 15689 mRNA_7321 0.66 -3.5
3,273 - 15689 mRNA_7321 0.73 -1.8
3,366 + 15689 mRNA_7321 0.78 -1.5
3,391 + 15689 mRNA_7321 0.80 -0.7
3,397 + 15689 mRNA_7321 0.80 -3.3
3,407 - 15689 mRNA_7321 0.80 -1.4
3,458 + 15689 mRNA_7321 0.83 -0.6
3,461 + 15689 mRNA_7321 0.83 -1.2
3,499 + 15689 mRNA_7321 0.85 0.2
3,517 + 15689 mRNA_7321 0.86 -1.0
3,520 + 15689 mRNA_7321 0.87 0.3
3,523 + 15689 mRNA_7321 0.87 -0.3
3,564 + 15689 mRNA_7321 0.89 -1.8
3,645 - -2.1
3,732 + -1.1
3,815 + -0.1
3,862 - -1.4
3,864 - -1.5
3,919 - -1.2
3,939 + -1.1
3,945 - -1.4
3,951 + -3.4
3,964 + -3.1
3,971 + -1.6
3,971 + -1.3
3,971 - -1.9
3,979 - -1.0
3,985 - -6.2
3,986 + -2.4
4,018 - -2.3
4,041 - -0.2
4,042 + -2.0
4,046 - -0.7
4,055 - -3.4
4,058 + 0.8
4,059 + 0.3
4,061 - -2.8
4,072 + 0.8
4,080 - -3.3
4,092 - 0.6
4,117 + -0.7
4,138 - 0.4
4,151 + -1.3
4,156 + -1.8
4,178 + -1.8
4,316 + -0.0
4,320 + -0.1
4,339 + -0.1
4,343 - 0.8