Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7316

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7314: 15682 - Hypothetical Protein, at 1377369 to 1379605 15682 mRNA_7315: 15683 - K05527 bolA BolA protein, at 1379979 to 1380539 15683 mRNA_7316: 15684 - KOG4178 Soluble epoxide hydrolase, at 1380551 to 1382072 15684 mRNA_7317: 15685 - K01652 E2.2.1.6L, ilvB, ilvG, ilvI acetolactate synthase I/II/III large subunit, at 1382527 to 1385139 15685

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,379,707 - -1.2
1,379,751 + -2.5
1,379,756 + 0.5
1,379,891 + -2.0
1,379,901 - -3.6
1,379,980 + -3.4
1,379,983 - -2.5
1,380,090 + 15683 mRNA_7315 0.20 -1.9
1,380,151 + 15683 mRNA_7315 0.31 -2.3
1,380,276 - 15683 mRNA_7315 0.53 1.0
1,380,716 + 15684 mRNA_7316 0.11 -0.7
1,380,759 + 15684 mRNA_7316 0.14 -2.4
1,381,148 + 15684 mRNA_7316 0.39 -3.7
1,381,299 + 15684 mRNA_7316 0.49 -1.7
1,381,465 - 15684 mRNA_7316 0.60 -2.6
1,381,885 + 15684 mRNA_7316 0.88 -1.0
1,381,887 - 15684 mRNA_7316 0.88 1.9
1,381,902 - 15684 mRNA_7316 0.89 -0.9
1,381,924 + -2.0
1,381,928 + -1.3
1,381,936 + -3.3
1,382,070 + -3.2
1,382,081 - -3.1
1,382,089 + -2.1
1,382,130 - -1.4
1,382,243 - -0.1
1,382,244 + -1.4
1,382,246 - -0.1
1,382,246 + -3.8
1,382,263 + -0.7
1,382,278 + -3.1