Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7308

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7307: 15675 - Hypothetical Protein, at 1359048 to 1360624 15675 mRNA_7308: 15676 - Hypothetical Protein, at 1360588 to 1362752 15676 mRNA_7309: 15677 - KOG0803 Predicted E3 ubiquitin ligase, at 1363408 to 1369017 15677

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,359,853 - 15675 mRNA_7307 0.51 -1.1
1,359,995 - 15675 mRNA_7307 0.60 0.3
1,360,101 + 15675 mRNA_7307 0.67 -1.1
1,360,153 + 15675 mRNA_7307 0.70 -0.9
1,360,280 + 15675 mRNA_7307 0.78 -2.6
1,360,424 + 15675 mRNA_7307 0.87 -1.3
1,360,425 + 15675 mRNA_7307 0.87 -0.5
1,360,548 - -3.5
1,360,613 + 0.2
1,360,650 + -0.3
1,360,694 - -0.8
1,360,967 - 15676 mRNA_7308 0.18 -1.2
1,361,109 + 15676 mRNA_7308 0.24 -1.2
1,361,190 - 15676 mRNA_7308 0.28 -0.5
1,361,433 + 15676 mRNA_7308 0.39 -1.0
1,361,896 - 15676 mRNA_7308 0.60 -1.4
1,362,992 - -1.9
1,363,018 + -0.6
1,363,187 - 0.1
1,363,317 + -0.0
1,363,361 + -1.9
1,363,381 - -1.1
1,363,432 - -2.1
1,363,488 + -1.5
1,363,499 - -0.8
1,363,519 + -2.2