Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7306

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7305: 15673 - Hypothetical Protein, at 1355275 to 1355712 15673 mRNA_7306: 15674 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 1356547 to 1358907 15674 mRNA_7307: 15675 - Hypothetical Protein, at 1359048 to 1360624 15675

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,355,587 + 15673 mRNA_7305 0.71 0.0
1,355,591 + 15673 mRNA_7305 0.72 -2.5
1,355,603 - 15673 mRNA_7305 0.75 -1.1
1,355,614 - 15673 mRNA_7305 0.77 -1.4
1,355,619 - 15673 mRNA_7305 0.79 -2.7
1,355,620 + 15673 mRNA_7305 0.79 0.1
1,355,630 - 15673 mRNA_7305 0.81 -1.4
1,355,741 - -3.1
1,355,863 + -2.9
1,356,030 - -3.4
1,356,064 - -4.4
1,356,068 + -1.5
1,356,087 + -0.4
1,356,168 + -3.1
1,356,180 - -0.4
1,356,186 + -0.0
1,356,199 + -2.4
1,356,235 - -1.0
1,356,318 + -1.4
1,356,554 + -1.9
1,356,577 + 1.3
1,356,616 + -2.9
1,356,755 + 0.2
1,356,765 - -2.1
1,356,978 + 15674 mRNA_7306 0.18 0.2
1,356,980 + 15674 mRNA_7306 0.18 -1.3
1,357,111 + 15674 mRNA_7306 0.24 -2.0
1,357,383 - 15674 mRNA_7306 0.35 -0.8
1,357,518 + 15674 mRNA_7306 0.41 -0.6
1,357,825 + 15674 mRNA_7306 0.54 -2.2
1,358,106 + 15674 mRNA_7306 0.66 -0.7
1,358,232 - 15674 mRNA_7306 0.71 -1.7
1,358,526 - 15674 mRNA_7306 0.84 -1.3
1,358,644 + 15674 mRNA_7306 0.89 -1.0
1,358,682 - -2.6
1,358,837 + -1.1
1,358,842 - -3.0
1,358,844 + -1.9
1,358,970 - 1.0
1,358,975 - -2.0
1,359,193 - 0.2
1,359,194 + -0.1
1,359,287 + 15675 mRNA_7307 0.15 0.5
1,359,853 - 15675 mRNA_7307 0.51 -1.1