Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7273

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7272: 15640 - Hypothetical Protein, at 1271073 to 1272368 15640 mRNA_7273: 15641 - K15859 SKN7 osomolarity two-component system, response regulator SKN7, at 1272818 to 1275702 15641 mRNA_7274: 15642 - Hypothetical Protein, at 1275952 to 1277293 15642

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,271,873 + 15640 mRNA_7272 0.62 -1.8
1,271,941 + 15640 mRNA_7272 0.67 -1.3
1,271,991 - 15640 mRNA_7272 0.71 -1.3
1,272,001 - 15640 mRNA_7272 0.72 -0.3
1,272,125 + 15640 mRNA_7272 0.81 -2.2
1,272,152 - 15640 mRNA_7272 0.83 -1.2
1,272,299 + -3.2
1,272,302 - -1.8
1,272,312 + 0.7
1,272,402 + -4.1
1,272,434 - -0.9
1,272,452 - -0.9
1,272,472 - -2.8
1,272,480 + -0.6
1,272,498 + -0.8
1,272,515 - -1.0
1,272,515 - -1.5
1,272,522 + -1.2
1,272,522 + -1.1
1,272,604 + -1.4
1,272,608 - -2.1
1,272,615 - -0.7
1,272,619 + -0.4
1,272,623 + -0.7
1,272,746 - -1.3
1,272,746 - -2.4
1,272,756 - -0.4
1,272,776 + -3.0
1,272,786 - -2.0
1,272,806 - -1.0
1,273,322 - 15641 mRNA_7273 0.17 -0.8
1,273,340 - 15641 mRNA_7273 0.18 -3.3
1,273,390 - 15641 mRNA_7273 0.20 -0.3
1,273,499 + 15641 mRNA_7273 0.24 -0.3
1,273,701 + 15641 mRNA_7273 0.31 0.1
1,274,019 - 15641 mRNA_7273 0.42 -1.2
1,274,044 - 15641 mRNA_7273 0.42 1.3
1,274,653 - 15641 mRNA_7273 0.64 -1.0
1,274,758 - 15641 mRNA_7273 0.67 -0.5
1,274,880 - 15641 mRNA_7273 0.71 -2.5
1,274,957 + 15641 mRNA_7273 0.74 -3.2
1,274,957 - 15641 mRNA_7273 0.74 -1.7
1,275,494 - -2.2
1,275,531 + -2.3
1,275,553 - -0.8
1,275,700 - -0.8
1,275,796 + -1.2
1,275,817 - -0.9
1,275,829 + -1.5
1,275,954 + -0.4
1,275,978 - 0.0
1,275,979 - -2.1
1,276,002 + -1.0
1,276,009 + -0.9