Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7269

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7267: 15635 - Hypothetical Protein, at 1262924 to 1263981 15635 mRNA_7268: 15636 - Hypothetical Protein, at 1264306 to 1264888 15636 mRNA_7269: 15637 - Hypothetical Protein, at 1264905 to 1266240 15637 mRNA_7270: 15638 - ProSiteProfiles-TEA domain profile.-PS51088, at 1266504 to 1267966 15638

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,264,048 + -0.9
1,264,082 + 0.6
1,264,087 + -2.0
1,264,087 + 1.3
1,264,262 + -1.0
1,264,288 + -0.8
1,264,396 + 15636 mRNA_7268 0.15 -2.9
1,264,434 - 15636 mRNA_7268 0.22 -3.1
1,264,534 + 15636 mRNA_7268 0.39 -2.6
1,264,548 - 15636 mRNA_7268 0.42 -2.4
1,264,550 + 15636 mRNA_7268 0.42 -4.1
1,264,683 + 15636 mRNA_7268 0.65 -3.3
1,264,742 + 15636 mRNA_7268 0.75 -1.4
1,264,963 + -1.1
1,264,964 - 0.8
1,264,998 - -2.8
1,264,999 + -1.9
1,265,000 + -0.3
1,265,002 + -2.3
1,265,026 + -0.9
1,265,032 + -1.0
1,265,033 + -0.0
1,265,252 - 15637 mRNA_7269 0.26 -1.4
1,265,406 + 15637 mRNA_7269 0.38 -2.0
1,265,582 - 15637 mRNA_7269 0.51 -0.9
1,265,662 - 15637 mRNA_7269 0.57 -0.2
1,265,841 - 15637 mRNA_7269 0.70 -1.1
1,265,851 + 15637 mRNA_7269 0.71 -0.7
1,265,951 - 15637 mRNA_7269 0.78 -1.3
1,265,951 - 15637 mRNA_7269 0.78 -2.5
1,265,976 - 15637 mRNA_7269 0.80 -0.2
1,265,994 - 15637 mRNA_7269 0.82 -1.8
1,266,009 - 15637 mRNA_7269 0.83 -1.2
1,266,020 + 15637 mRNA_7269 0.83 -3.1
1,266,033 - 15637 mRNA_7269 0.84 0.6
1,266,119 + -2.1
1,266,381 - -3.1
1,266,431 + -0.2
1,266,552 - -1.5
1,266,570 - 0.6
1,266,589 + -0.9
1,266,607 - -1.7
1,266,715 - 15638 mRNA_7270 0.14 -0.6
1,266,723 - 15638 mRNA_7270 0.15 -1.7
1,267,018 + 15638 mRNA_7270 0.35 -3.0
1,267,021 - 15638 mRNA_7270 0.35 -1.5