Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7261

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7261: 15629 - SUPERFAMILY--SSF51735, at 1246601 to 1248053 15629 mRNA_7262: 15630 - HMMPfam-Peptidase M50B-like-PF13398, at 1248701 to 1250915 15630

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,245,796 - -2.3
1,245,909 - 1.0
1,245,909 - -2.1
1,245,928 + -0.2
1,246,064 - -1.0
1,246,236 + -0.5
1,246,242 + 0.4
1,246,250 + -0.3
1,246,509 + -4.1
1,246,552 - -1.5
1,246,638 + -0.9
1,246,666 + -0.1
1,246,682 + -0.7
1,246,746 - -0.4
1,246,788 - 15629 mRNA_7261 0.13 0.7
1,246,923 + 15629 mRNA_7261 0.22 -0.1
1,246,945 + 15629 mRNA_7261 0.24 -2.2
1,246,980 - 15629 mRNA_7261 0.26 0.9
1,246,986 + 15629 mRNA_7261 0.26 -2.7
1,246,989 - 15629 mRNA_7261 0.27 -2.4
1,247,331 - 15629 mRNA_7261 0.50 0.6
1,247,544 - 15629 mRNA_7261 0.65 -3.0
1,247,680 + 15629 mRNA_7261 0.74 0.2
1,247,681 + 15629 mRNA_7261 0.74 0.1
1,247,682 - 15629 mRNA_7261 0.74 1.4
1,247,803 - 15629 mRNA_7261 0.83 -0.8
1,247,848 + 15629 mRNA_7261 0.86 -0.2
1,248,100 - -1.7
1,248,105 - 0.5
1,248,111 + -0.2
1,248,120 + -2.6
1,248,121 + -0.0
1,248,122 - -2.2
1,248,123 + -3.9
1,248,128 - -2.7
1,248,130 - -1.6
1,248,130 + -1.8
1,248,130 + 0.8
1,248,139 - -1.0
1,248,150 + -3.2
1,248,152 + -1.6
1,248,152 + -2.6
1,248,161 + -2.1
1,248,418 + -3.4
1,248,421 + -1.2
1,248,438 + 1.1
1,248,439 - -2.1
1,248,454 - -3.6
1,248,720 - -0.7
1,248,720 - -1.5
1,248,851 + -1.2
1,248,921 - -2.3
1,249,027 + 15630 mRNA_7262 0.15 -2.7