Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7252

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7251: 15619 - Hypothetical Protein, at 1220664 to 1222024 15619 mRNA_7252: 15620 - Hypothetical Protein, at 1222281 to 1223804 15620 mRNA_7253: 15621 - KOG2497 Predicted methyltransferase, at 1224548 to 1225738 15621

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,221,338 - 15619 mRNA_7251 0.50 -0.1
1,221,400 + 15619 mRNA_7251 0.54 -2.7
1,221,463 + 15619 mRNA_7251 0.59 -0.5
1,221,581 - 15619 mRNA_7251 0.67 -1.9
1,221,791 + 15619 mRNA_7251 0.83 -0.3
1,221,939 - -2.1
1,222,028 + 0.1
1,222,134 - -1.7
1,222,137 + -2.4
1,222,189 + -2.4
1,222,207 + -0.6
1,222,649 - 15620 mRNA_7252 0.24 -2.6
1,222,691 - 15620 mRNA_7252 0.27 -0.5
1,222,812 + 15620 mRNA_7252 0.35 0.8
1,222,850 - 15620 mRNA_7252 0.37 0.5
1,222,945 + 15620 mRNA_7252 0.44 -2.5
1,222,949 - 15620 mRNA_7252 0.44 -1.7
1,223,149 + 15620 mRNA_7252 0.57 -2.7
1,223,410 + 15620 mRNA_7252 0.74 -1.7
1,223,620 - 15620 mRNA_7252 0.88 -3.2
1,223,880 + 1.4
1,223,904 - -1.9
1,223,907 + -2.8
1,224,166 - -2.2
1,224,173 - -0.7
1,224,182 + -1.0
1,224,182 + -2.2
1,224,321 + -2.9
1,224,327 + 1.1
1,224,411 + -1.1
1,224,588 + -1.0
1,224,600 + -1.6
1,224,735 + 15621 mRNA_7253 0.16 -1.0