Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7227

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1175509 to 1176564 15594 mRNA_7227: 15595 - K03239 EIF2B1 translation initiation factor eIF-2B subunit alpha, at 1176800 to 1178543 15595 mRNA_7228: 15596 - KOG1674 Cyclin, at 1179153 to 1180280 15596

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,176,034 + 15594 mRNA_7226 0.50 -0.8
1,176,776 + -1.0
1,176,780 - -1.0
1,176,938 + -1.5
1,177,087 - 15595 mRNA_7227 0.16 -1.2
1,177,174 + 15595 mRNA_7227 0.21 -1.0
1,177,230 - 15595 mRNA_7227 0.25 -2.7
1,177,374 - 15595 mRNA_7227 0.33 -2.8
1,178,102 - 15595 mRNA_7227 0.75 -2.1
1,178,106 - 15595 mRNA_7227 0.75 0.4
1,178,109 - 15595 mRNA_7227 0.75 -1.9
1,178,375 + 0.5
1,178,387 + -2.2
1,178,389 + -1.4
1,178,398 - -3.1
1,178,439 + -1.8
1,178,548 + -0.2
1,178,557 + -0.8
1,178,573 + 0.1
1,178,580 - -1.2
1,178,590 + -1.1
1,178,590 - -0.0
1,178,591 + -1.5
1,178,591 + -1.3
1,178,592 - -0.8
1,178,594 + -1.0
1,178,598 + -1.6
1,178,636 - -2.7
1,178,648 - -0.5
1,178,648 - -3.7
1,178,651 - -1.0
1,178,658 + -4.1
1,178,662 - -0.4
1,178,663 + -2.9
1,178,666 - -1.4
1,178,667 - -0.4
1,178,668 + -2.6
1,178,671 + 0.1
1,178,678 + -2.1
1,178,681 + -2.4
1,178,682 - -0.6
1,178,690 - -1.5
1,178,690 - -4.2
1,178,692 + -2.1
1,178,694 + -3.7
1,178,714 + -1.3
1,178,733 - -1.4
1,178,749 - -2.1
1,178,800 - 0.6
1,178,832 - -2.5
1,178,843 + -2.4
1,178,854 - -0.8
1,178,875 + -0.6
1,178,894 - 0.4
1,178,895 + -0.4
1,178,895 + -0.8
1,178,954 - -2.6
1,178,968 - -0.3
1,178,969 - -0.0
1,178,978 - -0.1
1,178,978 - -1.9
1,178,981 + 0.8
1,178,983 - -1.1
1,178,988 - -1.5
1,178,988 + -1.0
1,178,995 - -1.3
1,179,006 + 0.5
1,179,114 - -0.6
1,179,120 + -3.1
1,179,143 + -1.1
1,179,145 + -0.9
1,179,152 - -1.2
1,179,157 + -0.9