Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7226

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7225: 15593 - Hypothetical Protein, at 1174359 to 1174926 15593 mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1175509 to 1176564 15594 mRNA_7227: 15595 - K03239 EIF2B1 translation initiation factor eIF-2B subunit alpha, at 1176800 to 1178543 15595

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,174,730 + 15593 mRNA_7225 0.65 -1.2
1,174,854 - 15593 mRNA_7225 0.87 0.4
1,174,863 + 15593 mRNA_7225 0.89 -1.7
1,175,186 - -2.2
1,175,756 + 15594 mRNA_7226 0.23 -2.4
1,176,034 + 15594 mRNA_7226 0.50 -0.8
1,176,776 + -1.0
1,176,780 - -1.0
1,176,938 + -1.5
1,177,087 - 15595 mRNA_7227 0.16 -1.2
1,177,174 + 15595 mRNA_7227 0.21 -1.0
1,177,230 - 15595 mRNA_7227 0.25 -2.7
1,177,374 - 15595 mRNA_7227 0.33 -2.8