Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7206

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7205: 15573 - Hypothetical Protein, at 1120664 to 1121084 15573 mRNA_7206: 15574 - BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce..., at 1121305 to 1122113 15574 mRNA_7207: 15575 - KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases, at 1122389 to 1123916 15575

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,120,363 + 0.4
1,120,421 + -3.4
1,120,479 + -3.0
1,120,484 + -0.3
1,120,506 - 0.7
1,120,516 + -2.6
1,120,569 + -1.4
1,120,582 - 0.7
1,120,584 + -2.5
1,120,828 + 15573 mRNA_7205 0.39 -2.4
1,120,835 + 15573 mRNA_7205 0.41 -1.8
1,120,838 + 15573 mRNA_7205 0.41 -1.5
1,120,864 + 15573 mRNA_7205 0.48 -0.6
1,120,926 - 15573 mRNA_7205 0.62 1.1
1,120,968 - 15573 mRNA_7205 0.72 1.3
1,120,969 - 15573 mRNA_7205 0.72 -2.6
1,120,970 + 15573 mRNA_7205 0.73 0.2
1,120,980 + 15573 mRNA_7205 0.75 -2.2
1,121,002 + 15573 mRNA_7205 0.80 -1.3
1,121,050 + -1.7
1,121,103 + -0.1
1,121,104 + -1.5
1,121,116 - -2.8
1,121,137 + 0.6
1,121,141 + -1.1
1,121,152 + -0.8
1,121,153 - -0.6
1,121,153 - -1.6
1,121,154 - -3.7
1,121,166 - -1.8
1,121,170 - -2.0
1,121,174 - -0.3
1,121,175 - -0.7
1,121,175 - -0.6
1,121,181 - 0.5
1,121,183 + -2.2
1,121,183 + -1.2
1,121,197 + -3.3
1,121,200 + -2.7
1,121,208 + -0.0
1,121,214 + -1.5
1,121,220 - -1.1
1,121,313 - -3.6
1,121,343 + -0.7
1,121,405 + 15574 mRNA_7206 0.12 -2.5
1,121,412 - 15574 mRNA_7206 0.13 -0.5
1,121,543 + 15574 mRNA_7206 0.29 -1.6
1,121,813 - 15574 mRNA_7206 0.63 -3.0
1,122,331 + -1.2
1,122,397 + 1.3
1,122,404 + -2.5
1,122,813 - 15575 mRNA_7207 0.28 -1.9
1,122,830 - 15575 mRNA_7207 0.29 -0.3
1,122,867 - 15575 mRNA_7207 0.31 0.1