Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7162

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1025200 to 1027264 15530 mRNA_7163: 15531 - Hypothetical Protein, at 1027440 to 1028287 15531

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,024,809 - 0.1
1,024,856 + -1.1
1,025,252 - 1.7
1,025,552 + 15530 mRNA_7162 0.17 -1.8
1,025,554 + 15530 mRNA_7162 0.17 -3.3
1,025,566 - 15530 mRNA_7162 0.18 -3.4
1,026,294 + 15530 mRNA_7162 0.53 -3.0
1,026,310 - 15530 mRNA_7162 0.54 -3.1
1,026,584 - 15530 mRNA_7162 0.67 -2.4
1,026,719 + 15530 mRNA_7162 0.74 -2.6
1,026,939 - 15530 mRNA_7162 0.84 -1.3
1,027,073 - -0.7
1,027,086 - -0.6
1,027,379 - -0.5
1,027,620 - 15531 mRNA_7163 0.21 -1.2
1,027,631 + 15531 mRNA_7163 0.23 -2.1
1,027,774 + 15531 mRNA_7163 0.39 -1.1
1,028,081 + 15531 mRNA_7163 0.76 -0.8
1,028,202 - 15531 mRNA_7163 0.90 0.2
1,028,203 - -1.2
1,028,204 + -1.1
1,028,208 - 0.4
1,028,214 + 1.1
1,028,214 + -0.8
1,028,216 + -0.7
1,028,224 - -1.7
1,028,239 + -1.6