Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7157

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7156: 15524 - K20102 YTHDF YTH domain-containing family protein, at 1010794 to 1011457 15524 mRNA_7157: 15525 - KOG2936 Uncharacterized conserved protein, at 1012325 to 1013982 15525 mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1014163 to 1016901 15526

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,011,351 - 15524 mRNA_7156 0.84 -3.3
1,011,422 + -2.4
1,011,424 - -1.5
1,011,520 - -1.7
1,011,552 + -1.6
1,011,561 - -1.1
1,011,640 - -2.3
1,011,654 - -0.8
1,011,687 - 0.9
1,011,725 + -0.3
1,011,812 + -2.1
1,012,084 + -1.4
1,012,090 + -0.0
1,012,257 + -0.6
1,012,261 - 1.3
1,012,434 + 0.5
1,012,525 - 15525 mRNA_7157 0.12 -0.8
1,012,534 + 15525 mRNA_7157 0.13 -0.3
1,012,708 - 15525 mRNA_7157 0.23 -1.8
1,012,778 + 15525 mRNA_7157 0.27 -2.0
1,012,828 + 15525 mRNA_7157 0.30 -2.3
1,012,842 - 15525 mRNA_7157 0.31 1.1
1,012,863 + 15525 mRNA_7157 0.32 -0.2
1,013,396 - 15525 mRNA_7157 0.65 -2.2
1,013,404 - 15525 mRNA_7157 0.65 -0.2
1,013,427 - 15525 mRNA_7157 0.66 -0.8
1,014,649 - 15526 mRNA_7158 0.18 -0.7
1,014,921 + 15526 mRNA_7158 0.28 -0.2