Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7141

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971914 to 976417 15508 mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976528 to 979510 15509 mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979628 to 983826 15510

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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975,755 + 15508 mRNA_7140 0.85 -0.6
976,065 - -3.3
976,209 - -1.9
976,314 - -1.9
976,380 + -1.3
976,501 - -0.2
976,519 + -3.7
976,519 + -1.0
976,635 - -2.9
976,636 - -2.3
976,824 + 0.8
976,933 - 15509 mRNA_7141 0.14 -0.6
976,944 - 15509 mRNA_7141 0.14 -1.9
976,952 + 15509 mRNA_7141 0.14 -1.7
976,953 + 15509 mRNA_7141 0.14 -2.7
976,967 - 15509 mRNA_7141 0.15 -2.1
977,587 - 15509 mRNA_7141 0.36 -1.6
977,815 + 15509 mRNA_7141 0.43 -0.1
978,228 - 15509 mRNA_7141 0.57 -1.2
978,545 + 15509 mRNA_7141 0.68 -2.3
978,714 - 15509 mRNA_7141 0.73 -2.2
978,844 + 15509 mRNA_7141 0.78 -0.9
979,150 + 15509 mRNA_7141 0.88 -2.1
979,194 - 15509 mRNA_7141 0.89 -0.8
979,556 - 0.6
979,793 + -2.5
979,983 - -2.8
980,035 + -2.2
980,101 + 15510 mRNA_7142 0.11 -0.8
980,103 - 15510 mRNA_7142 0.11 -0.9
980,283 - 15510 mRNA_7142 0.16 0.1