Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7123

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7122: 15490 - K14791 PWP1 periodic tryptophan protein 1, at 930377 to 932524 15490 mRNA_7123: 15491 - K00683 QPCT glutaminyl-peptide cyclotransferase, at 932672 to 934092 15491 mRNA_7124: 15492 - K02872 RP-L13Ae, RPL13A large subunit ribosomal protein L13Ae, at 934341 to 935492 15492

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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932,807 + -1.3
933,030 - 15491 mRNA_7123 0.25 -1.1
933,052 - 15491 mRNA_7123 0.27 -3.3
933,081 - 15491 mRNA_7123 0.29 -2.4
933,357 - 15491 mRNA_7123 0.48 -1.1
933,365 + 15491 mRNA_7123 0.49 -1.1
933,655 + 15491 mRNA_7123 0.69 0.4
933,661 + 15491 mRNA_7123 0.70 -1.7
933,680 - 15491 mRNA_7123 0.71 0.7
933,956 - -0.9
933,957 + -1.6
933,961 - -0.6
933,963 - -1.8
933,982 + -0.6
934,101 + -1.7
934,124 - -1.0
934,138 + -1.4
934,147 + -0.8
934,277 + 0.2