Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7121

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7120: 15488 - K01649 leuA 2-isopropylmalate synthase, at 925673 to 928023 15488 mRNA_7121: 15489 - PRINTS-Proline rich extensin signature-PR01217,ProSiteProfiles-EH domain profile.-PS50031, at 928418 to 929954 15489 mRNA_7122: 15490 - K14791 PWP1 periodic tryptophan protein 1, at 930377 to 932524 15490

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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928,041 - -1.2
928,064 + -0.9
928,173 - -2.2
928,174 - -0.7
928,183 - 0.3
928,194 - 0.7
928,360 - -0.8
928,401 - -2.9
928,540 + -1.7
928,545 - -0.4
929,122 - 15489 mRNA_7121 0.46 -1.2
929,239 - 15489 mRNA_7121 0.53 0.3
929,246 - 15489 mRNA_7121 0.54 -4.4
929,429 + 15489 mRNA_7121 0.66 -1.2
929,684 - 15489 mRNA_7121 0.82 -0.3
929,685 - 15489 mRNA_7121 0.82 -2.1
929,692 + 15489 mRNA_7121 0.83 -1.0
929,818 - -3.8
929,948 - -0.2
929,949 + -2.2
929,975 + -1.7
930,012 - -0.1
930,016 - 0.1