Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7098

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7097: 15465 - K03064 PSMC6, RPT4 26S proteasome regulatory subunit T4, at 875663 to 877708 15465 mRNA_7098: 15466 - KOG2633 Hismacro and SEC14 domain-containing proteins, at 877934 to 879350 15466 mRNA_7099: 15467 - K12845 SNU13, NHP2L U4/U6 small nuclear ribonucleoprotein SNU13, at 879733 to 880505 15467

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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877,772 + -1.6
877,798 + -1.8
877,803 + -0.3
878,086 + 15466 mRNA_7098 0.11 -3.0
878,232 - 15466 mRNA_7098 0.21 -2.9
878,357 - 15466 mRNA_7098 0.30 -0.9
878,380 - 15466 mRNA_7098 0.31 -1.7
878,409 + 15466 mRNA_7098 0.34 0.5
878,524 - 15466 mRNA_7098 0.42 -1.2
878,643 - 15466 mRNA_7098 0.50 -1.4
878,806 - 15466 mRNA_7098 0.62 -0.8
878,925 - 15466 mRNA_7098 0.70 -2.4
878,929 + 15466 mRNA_7098 0.70 -1.0
878,948 - 15466 mRNA_7098 0.72 -3.3
879,240 + -0.4
879,410 + 0.4
879,524 + -1.5
879,526 + -1.8
879,535 - -0.1
879,548 - -0.3