Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7092

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7091: 15459 - ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 859673 to 862971 15459 mRNA_7092: 15460 - KOG2545 Conserved membrane protein, at 863308 to 866540 15460 mRNA_7093: 15461 - K16073 ALR, MNR magnesium transporter, at 866899 to 868705 15461

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
862,356 - 15459 mRNA_7091 0.81 -2.0
862,787 + -3.6
862,813 - -2.3
862,831 - -1.6
862,848 - -1.2
862,975 + -1.8
863,009 + -1.6
863,175 - -0.1
864,048 + 15460 mRNA_7092 0.23 0.3
864,049 + 15460 mRNA_7092 0.23 -1.5
864,049 - 15460 mRNA_7092 0.23 -0.5
864,057 + 15460 mRNA_7092 0.23 0.0
864,223 + 15460 mRNA_7092 0.28 -1.4
864,341 + 15460 mRNA_7092 0.32 -5.1
864,377 - 15460 mRNA_7092 0.33 -0.7
864,532 + 15460 mRNA_7092 0.38 -3.3
864,810 - 15460 mRNA_7092 0.46 0.2
864,838 + 15460 mRNA_7092 0.47 -0.3
865,100 - 15460 mRNA_7092 0.55 -2.2
865,259 + 15460 mRNA_7092 0.60 -4.2
865,404 + 15460 mRNA_7092 0.65 0.7
865,425 + 15460 mRNA_7092 0.65 -1.8
865,554 - 15460 mRNA_7092 0.69 -2.6
866,121 - 15460 mRNA_7092 0.87 -2.1
866,301 + -2.7
866,428 - -0.3
866,428 + 1.0
866,438 + -1.4
866,440 + -0.3
866,444 + 0.1
866,497 + -0.9
866,574 - 0.1
866,584 - -1.2
866,590 - -3.0
866,594 + 0.9
866,598 - -0.8
866,609 - 0.3
866,614 + -2.0
866,621 + 1.2