Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7081

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7080: 15448 - K12481 RBSN, ZFYVE20 rabenosyn-5, at 834064 to 836328 15448 mRNA_7081: 15449 - K00272 DDO D-aspartate oxidase, at 836490 to 837896 15449 mRNA_7082: 15450 - K20406 NPRL3 nitrogen permease regulator 3-like protein, at 838009 to 840569 15450

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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835,613 + 15448 mRNA_7080 0.68 -2.4
836,047 - 15448 mRNA_7080 0.88 -0.1
836,218 - -0.4
836,506 + -2.1
836,517 + -1.3
836,542 - -0.1
836,565 - -1.3
836,664 - 15449 mRNA_7081 0.12 -1.0
836,666 - 15449 mRNA_7081 0.13 -3.4
836,813 - 15449 mRNA_7081 0.23 -1.7
836,970 - 15449 mRNA_7081 0.34 -2.8
837,515 + 15449 mRNA_7081 0.73 -1.4
837,670 - 15449 mRNA_7081 0.84 -1.6
837,831 - -3.1
837,838 + 0.3
837,966 - -2.6
837,967 - -0.4
837,982 + 0.5
837,992 - -1.6
838,007 - -1.2
838,008 + -1.6
838,015 + 0.1
838,137 + 0.6
838,279 - 15450 mRNA_7082 0.11 -3.0