Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7078

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827085 to 831280 15445 mRNA_7078: 15446 - Hypothetical Protein, at 831735 to 832558 15446 mRNA_7079: 15447 - Hypothetical Protein, at 833021 to 833925 15447

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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830,834 - 15445 mRNA_7077 0.89 -2.3
830,842 + 15445 mRNA_7077 0.90 -1.5
830,973 + -3.1
831,111 + -0.4
831,121 - 0.0
831,251 + -0.7
831,270 + -1.9
831,280 + -1.5
831,372 + -2.2
831,399 - -3.1
831,412 - -4.2
831,539 + 0.3
831,556 - -2.8
831,558 - -2.1
831,558 - -0.3
831,565 - -0.1
831,575 + -1.5
831,579 + -1.9
831,584 - -2.3
831,585 + 0.4
831,586 - -1.7
831,586 - -1.6
831,592 + -0.8
831,598 - -2.0
831,604 + -2.8
831,610 + -4.3
831,653 - 0.5
831,666 + -2.3
831,756 + -0.9
831,856 + 15446 mRNA_7078 0.15 -1.4
832,583 - -0.3
832,593 + 2.5
832,723 - 0.1
832,728 + -2.2
832,731 - -0.9
832,764 - -0.2
832,985 - -0.4
832,987 - -0.2
833,111 - -2.2
833,130 + 15447 mRNA_7079 0.12 -1.6
833,142 - 15447 mRNA_7079 0.13 -0.7
833,281 - 15447 mRNA_7079 0.29 -2.5
833,305 + 15447 mRNA_7079 0.31 -1.7
833,422 - 15447 mRNA_7079 0.44 -1.4
833,444 - 15447 mRNA_7079 0.47 0.3
833,444 + 15447 mRNA_7079 0.47 -2.3