Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7077

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7076: 15444 - K17413 MRPS35 small subunit ribosomal protein S35, at 825955 to 826915 15444 mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827085 to 831280 15445 mRNA_7078: 15446 - Hypothetical Protein, at 831735 to 832558 15446

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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826,917 + -2.2
826,976 - -0.5
827,128 - -0.2
827,203 + -2.0
827,364 + -1.9
827,365 - -1.1
827,423 - -0.6
827,510 - 15445 mRNA_7077 0.10 -2.6
827,554 + 15445 mRNA_7077 0.11 -0.9
827,699 + 15445 mRNA_7077 0.15 -1.1
828,140 - 15445 mRNA_7077 0.25 -4.3
828,140 - 15445 mRNA_7077 0.25 -1.2
828,301 + 15445 mRNA_7077 0.29 -1.4
828,312 + 15445 mRNA_7077 0.29 -1.4
828,579 - 15445 mRNA_7077 0.36 -5.1
829,028 + 15445 mRNA_7077 0.46 -3.0
829,088 - 15445 mRNA_7077 0.48 -2.5
829,145 + 15445 mRNA_7077 0.49 -2.6
829,344 - 15445 mRNA_7077 0.54 -1.3
829,501 - 15445 mRNA_7077 0.58 -2.2
829,620 - 15445 mRNA_7077 0.60 -0.6
830,669 - 15445 mRNA_7077 0.85 -0.0
830,834 - 15445 mRNA_7077 0.89 -2.3
830,842 + 15445 mRNA_7077 0.90 -1.5
830,973 + -3.1
831,111 + -0.4
831,121 - 0.0
831,251 + -0.7
831,270 + -1.9
831,280 + -1.5
831,372 + -2.2
831,399 - -3.1
831,412 - -4.2
831,539 + 0.3
831,556 - -2.8
831,558 - -2.1
831,558 - -0.3
831,565 - -0.1
831,575 + -1.5
831,579 + -1.9
831,584 - -2.3
831,585 + 0.4
831,586 - -1.7
831,586 - -1.6
831,592 + -0.8
831,598 - -2.0
831,604 + -2.8
831,610 + -4.3
831,653 - 0.5
831,666 + -2.3
831,756 + -0.9
831,856 + 15446 mRNA_7078 0.15 -1.4