Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7070

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806497 to 812015 15437 mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812673 to 814209 15438 mRNA_7071: 15439 - BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF..., at 814580 to 815327 15439

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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811,993 + -1.0
812,128 - -2.6
812,131 + -2.7
812,141 - -2.3
812,150 + -1.5
812,192 - -0.8
812,226 - -0.4
812,226 - -0.3
812,248 + -0.0
812,253 + -1.6
812,254 + -2.7
812,258 - -0.1
812,261 + -0.0
812,281 + -1.2
812,286 - 0.6
812,294 - -1.4
812,318 - -4.3
812,323 - -0.4
812,324 + -0.6
812,339 - -0.5
812,377 - 0.5
812,402 + 0.2
812,405 - -2.0
812,406 - -3.3
812,415 + -0.6
812,416 - -1.0
812,416 + -0.7
812,424 - -0.2
812,424 + -0.6
812,426 - -0.0
812,449 - 1.5
812,463 - -2.5
812,466 + -0.7
812,469 + -2.1
812,485 - -2.1
812,489 + -0.5
812,490 + -1.4
812,608 - -1.9
812,612 - -0.5
812,628 + -3.7
812,779 + -0.6
813,158 - 15438 mRNA_7070 0.32 -2.2
813,189 + 15438 mRNA_7070 0.34 0.6
813,342 - 15438 mRNA_7070 0.44 -0.3
813,430 - 15438 mRNA_7070 0.49 -2.7
813,478 - 15438 mRNA_7070 0.52 0.1
813,481 - 15438 mRNA_7070 0.53 -0.0
813,491 + 15438 mRNA_7070 0.53 -0.7
813,730 + 15438 mRNA_7070 0.69 0.9
813,825 + 15438 mRNA_7070 0.75 -0.3
814,067 - -3.4
814,185 + -1.6
814,322 + 0.0
814,333 + -0.8
814,344 - 0.3
814,354 - -1.5
814,357 - 0.3
814,357 + -0.7
814,368 + -1.5
814,407 - -1.6
814,417 - -0.8
814,472 - 1.4
814,478 - -1.6
814,532 + -0.9
814,652 + -1.4
814,665 - 15439 mRNA_7071 0.11 0.7
814,807 - 15439 mRNA_7071 0.30 -0.7
814,820 - 15439 mRNA_7071 0.32 2.4