Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7058

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7057: 15425 - K15634 gpmB probable phosphoglycerate mutase, at 777852 to 778935 15425 mRNA_7058: 15426 - KOG0206 P-type ATPase, at 779457 to 784844 15426 mRNA_7059: 15427 - BLAST golgi apparatus membrane protein [Pochonia chlamy..., at 785063 to 786823 15427

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
778,634 - 15425 mRNA_7057 0.72 -1.1
778,825 - 15425 mRNA_7057 0.90 -0.5
778,862 + -2.0
778,945 + -0.1
778,965 + 0.8
779,069 - -2.2
779,078 + 0.7
779,089 - -1.7
779,090 - -0.7
779,095 + -1.1
779,110 + -1.6
779,117 - -0.7
779,213 - -1.3
779,219 + 0.4
779,224 + -1.0
779,243 + -0.1
779,252 - -1.7
779,253 + -0.3
779,255 - -1.2
779,256 + -0.7
779,257 + -1.5
779,257 - -0.6
779,305 - -1.2
779,406 + -0.9
779,408 - -1.0
779,432 - -2.7
779,441 + -2.6
779,578 - 1.5
779,851 - -2.4
779,986 - -0.0
780,169 + 15426 mRNA_7058 0.13 -1.6
780,551 - 15426 mRNA_7058 0.20 -2.1
780,552 + 15426 mRNA_7058 0.20 -1.9
780,709 + 15426 mRNA_7058 0.23 -2.2
780,751 + 15426 mRNA_7058 0.24 -1.8
780,888 - 15426 mRNA_7058 0.27 -0.8
781,215 + 15426 mRNA_7058 0.33 -2.7
781,510 - 15426 mRNA_7058 0.38 -1.7
781,592 - 15426 mRNA_7058 0.40 -2.0
781,984 - 15426 mRNA_7058 0.47 -2.8
782,589 + 15426 mRNA_7058 0.58 -4.7
782,919 - 15426 mRNA_7058 0.64 -1.2
782,922 + 15426 mRNA_7058 0.64 -2.5
782,943 - 15426 mRNA_7058 0.65 -1.6
783,328 + 15426 mRNA_7058 0.72 -0.7
783,772 - 15426 mRNA_7058 0.80 -2.2
783,824 + 15426 mRNA_7058 0.81 -2.3
783,863 - 15426 mRNA_7058 0.82 -0.3
783,888 + 15426 mRNA_7058 0.82 -1.5
784,083 - 15426 mRNA_7058 0.86 -1.3
784,251 + 15426 mRNA_7058 0.89 -2.7
784,452 - -3.6
784,703 + -0.8
784,789 - -1.3
784,798 - -0.7
784,822 - -2.0
785,100 - -0.5
785,275 + 15427 mRNA_7059 0.12 -0.7
785,377 - 15427 mRNA_7059 0.18 0.0
785,527 - 15427 mRNA_7059 0.26 -2.0