Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7055

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770607 to 773938 15422 mRNA_7055: 15423 - K03841 FBP, fbp fructose-1,6-bisphosphatase I, at 774217 to 775850 15423 mRNA_7056: 15424 - K01557 FAHD1 acylpyruvate hydrolase, at 776372 to 777538 15424

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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773,982 + -0.9
774,003 + 1.1
774,025 + -2.6
774,152 + -0.6
774,467 - 15423 mRNA_7055 0.15 -2.7
774,871 - 15423 mRNA_7055 0.40 -1.6
774,987 - 15423 mRNA_7055 0.47 -3.4
775,204 + 15423 mRNA_7055 0.60 -4.5
775,288 - 15423 mRNA_7055 0.66 -1.1
775,416 - 15423 mRNA_7055 0.73 -1.8
775,446 + 15423 mRNA_7055 0.75 -0.2
775,575 - 15423 mRNA_7055 0.83 -1.7
775,636 + 15423 mRNA_7055 0.87 -1.1
775,704 + -2.2
775,708 - -1.7
775,726 + -1.2
775,734 - -2.3
775,738 - 1.2
775,739 + -0.0
775,739 - -1.4
775,740 + -3.1
775,746 + -1.9
775,749 + -1.5
775,846 - -2.1
775,861 + -2.0
775,903 - -0.6
776,013 - -2.5
776,026 - -0.9
776,028 - 0.7
776,032 + -2.3
776,034 - -4.0
776,043 - -0.8
776,043 + -1.1
776,047 - -1.0
776,050 - -0.5
776,051 - -3.9
776,053 - -0.3
776,057 + 2.2
776,058 + -0.5
776,062 - -1.0
776,064 - -1.9
776,077 + -0.5
776,124 - -1.1
776,125 - -3.5
776,132 - 0.8
776,132 - -2.6
776,147 + 0.3
776,149 - -0.6
776,168 + -1.6
776,179 - -1.5
776,208 + -2.4
776,298 - -0.4
776,305 + 0.6
776,307 + 0.2
776,324 - -1.8
776,442 + -2.6
776,445 - 0.6
776,763 + 15424 mRNA_7056 0.34 -2.8