Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7053

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7052: 15420 - K01624 FBA, fbaA fructose-bisphosphate aldolase, class II, at 764515 to 766298 15420 mRNA_7053: 15421 - K01192 E3.2.1.25, MANBA, manB beta-mannosidase, at 766585 to 770373 15421 mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770607 to 773938 15422

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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766,366 - -1.1
766,370 + -2.2
766,409 - -3.5
766,542 - 0.1
766,687 + -1.7
766,687 - -0.5
766,692 + -2.4
767,118 - 15421 mRNA_7053 0.14 -2.4
767,133 + 15421 mRNA_7053 0.14 -3.5
767,218 + 15421 mRNA_7053 0.17 -3.1
767,249 - 15421 mRNA_7053 0.18 -1.2
767,688 + 15421 mRNA_7053 0.29 -1.2
767,698 - 15421 mRNA_7053 0.29 0.2
767,831 - 15421 mRNA_7053 0.33 0.2
768,274 + 15421 mRNA_7053 0.45 -0.3
768,906 - 15421 mRNA_7053 0.61 -1.6
769,189 - 15421 mRNA_7053 0.69 -3.6
769,274 - 15421 mRNA_7053 0.71 -1.8
769,454 - 15421 mRNA_7053 0.76 -0.9
769,588 - 15421 mRNA_7053 0.79 -3.3
770,030 + -1.1
770,158 - -1.8
770,370 - -0.1