Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7043

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7042: 15410 - Hypothetical Protein, at 735452 to 736654 15410 mRNA_7043: 15411 - Hypothetical Protein, at 736926 to 740766 15411 mRNA_7044: 15412 - KOG4299 PHD Zn-finger protein, at 740961 to 743698 15412

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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736,084 + 15410 mRNA_7042 0.53 0.3
736,229 - 15410 mRNA_7042 0.65 -0.5
736,541 + 0.8
736,665 + -1.1
736,788 + 0.3
736,794 - -2.0
736,803 + -1.6
736,806 - 0.8
736,808 - -0.4
736,811 + 0.1
736,812 - -1.1
736,825 - 0.6
736,834 - -1.9
736,834 - -3.0
736,843 + 0.0
736,855 + -2.1
736,855 - -2.7
736,856 - -3.2
736,858 + -1.0
736,898 - 0.6
736,913 + -1.6
736,917 + -1.0
736,930 + -0.9
736,935 - -1.8
736,960 + -1.1
736,964 - -3.0
736,972 + -3.4
736,977 - -0.6
736,980 + -1.4
736,986 + -1.4
736,993 - -0.9
737,001 - -1.5
737,002 + -1.3
737,026 - -0.7
737,031 + -1.2
737,032 - -2.7
737,056 + 0.1
737,069 - -0.8
737,081 + 0.1
737,084 - -0.5
737,098 + -3.1
737,098 - -2.3
737,109 - -1.1
737,119 - -2.5
737,119 + -1.5
737,122 - -0.3
737,128 - 0.1
737,143 - -4.1
737,146 - 1.7
737,156 - -0.9
737,157 - -1.4
737,157 + -0.3
737,161 - -2.1
737,163 - 1.3
737,163 + -2.0
737,166 + -1.4
737,168 + -1.5
737,169 - -3.0
737,171 - -2.8
737,175 + -1.5
737,179 + -1.3
737,183 + -0.4
737,198 + -2.0
737,320 - 15411 mRNA_7043 0.10 -2.7
737,327 + 15411 mRNA_7043 0.10 -1.3
737,346 - 15411 mRNA_7043 0.11 -1.9
737,642 + 15411 mRNA_7043 0.19 -2.8
738,037 - 15411 mRNA_7043 0.29 -4.7
738,037 - 15411 mRNA_7043 0.29 -2.8
738,069 - 15411 mRNA_7043 0.30 -0.9
738,120 - 15411 mRNA_7043 0.31 -1.1
738,176 + 15411 mRNA_7043 0.33 0.3
738,307 + 15411 mRNA_7043 0.36 -0.1
738,624 + 15411 mRNA_7043 0.44 -2.9
738,640 - 15411 mRNA_7043 0.45 -3.0
738,933 - 15411 mRNA_7043 0.52 -2.0
739,037 - 15411 mRNA_7043 0.55 -2.6
739,507 + 15411 mRNA_7043 0.67 -1.6
739,703 - 15411 mRNA_7043 0.72 -0.6
740,660 + -0.9
740,866 + -0.1
741,139 - -1.1