Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6965

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551090 to 553316 15332 mRNA_6965: 15333 - Hypothetical Protein, at 553877 to 555010 15333 mRNA_6966: 15334 - K02210 MCM7, CDC47 DNA replication licensing factor MCM7, at 555370 to 558100 15334

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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553,384 + -2.0
553,441 + -2.3
554,082 + 15333 mRNA_6965 0.18 0.2
554,102 + 15333 mRNA_6965 0.20 -0.1
554,110 - 15333 mRNA_6965 0.21 -1.0
554,394 - 15333 mRNA_6965 0.46 -2.6
554,406 - 15333 mRNA_6965 0.47 -3.0
554,768 + 15333 mRNA_6965 0.79 -2.2
554,772 + 15333 mRNA_6965 0.79 -2.3
554,956 + -3.7
555,105 + 0.6
555,129 + -3.7
555,129 + -0.4
555,132 - -0.6
555,145 + 0.2
555,158 - -3.2
555,287 - -0.4
555,303 + -1.3