Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6945

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6944: 15312 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 495585 to 496942 15312 mRNA_6945: 15313 - SUPERFAMILY--SSF52047, at 497234 to 499004 15313 mRNA_6946: 15314 - K04713 SUR2 sphinganine C4-monooxygenase, at 499195 to 500447 15314

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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496,680 - 15312 mRNA_6944 0.81 -0.9
496,864 - -2.3
496,886 - -0.4
496,974 - -0.1
496,989 - -0.6
497,002 - -0.2
497,148 + -0.3
497,294 - -1.1
497,438 + 15313 mRNA_6945 0.12 -2.7
497,449 - 15313 mRNA_6945 0.12 0.6
497,459 + 15313 mRNA_6945 0.13 -1.2
497,594 - 15313 mRNA_6945 0.20 -0.7
497,597 + 15313 mRNA_6945 0.20 -1.8
497,997 + 15313 mRNA_6945 0.43 -2.5
498,333 - 15313 mRNA_6945 0.62 1.5
498,486 + 15313 mRNA_6945 0.71 -1.7
498,574 - 15313 mRNA_6945 0.76 -1.0
498,931 + -1.0
498,941 - -1.0
498,942 - -2.6
498,947 + 0.2
499,066 - -1.0
499,073 + -2.2