Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6942

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6941: 15309 - K02154 ATPeV0A, ATP6N V-type H+-transporting ATPase subunit a, at 487367 to 491016 15309 mRNA_6942: 15310 - K15029 EIF3L translation initiation factor 3 subunit L, at 491144 to 493608 15310 mRNA_6943: 15311 - SUPERFAMILY--SSF52047, at 493796 to 495109 15311

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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491,071 + -2.4
491,078 + -1.0
491,091 - -2.1
491,109 + -0.4
491,112 - -3.1
491,116 + -1.1
491,254 + 0.4
491,838 - 15310 mRNA_6942 0.28 -1.8
491,953 - 15310 mRNA_6942 0.33 0.3
491,997 - 15310 mRNA_6942 0.35 -0.8
492,142 + 15310 mRNA_6942 0.40 -0.9
493,289 - 15310 mRNA_6942 0.87 2.3
493,292 + 15310 mRNA_6942 0.87 -1.5
493,434 - -0.5
493,440 + -0.1
493,506 + -0.1
493,854 - -0.3
493,894 + -1.5
494,151 - 15311 mRNA_6943 0.27 -2.4
494,172 + 15311 mRNA_6943 0.29 -2.3
494,444 + 15311 mRNA_6943 0.49 -1.3