Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6937

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6936: 15304 - K09669 FUT10 alpha-1,3-fucosyltransferase 10, at 473933 to 475521 15304 mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476107 to 478851 15305 mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478965 to 480801 15306

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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475,134 - 15304 mRNA_6936 0.76 -2.1
475,259 - 15304 mRNA_6936 0.83 -1.1
475,532 - -1.6
475,533 + -0.8
475,556 - -1.7
475,587 - -0.1
475,736 + -4.8
475,862 + 0.9
475,869 + -1.9
476,163 + -2.2
476,289 + -1.3
476,560 + 15305 mRNA_6937 0.17 0.1
476,721 - 15305 mRNA_6937 0.22 -0.2
477,079 + 15305 mRNA_6937 0.35 -0.7
477,144 - 15305 mRNA_6937 0.38 -0.9
477,280 - 15305 mRNA_6937 0.43 -2.4
477,735 - 15305 mRNA_6937 0.59 -2.9
478,050 - 15305 mRNA_6937 0.71 -2.1
478,137 + 15305 mRNA_6937 0.74 -1.1
478,172 + 15305 mRNA_6937 0.75 0.7
478,337 + 15305 mRNA_6937 0.81 -2.1
478,482 + 15305 mRNA_6937 0.87 0.2
478,580 - -1.9
478,930 - -0.7
479,067 - -3.7