Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6904

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6903: 15271 - Hypothetical Protein, at 393744 to 394954 15271 mRNA_6904: 15272 - HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757, at 395182 to 396886 15272 mRNA_6905: 15273 - K14300 NUP133 nuclear pore complex protein Nup133, at 397122 to 402305 15273

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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394,192 - 15271 mRNA_6903 0.37 0.7
394,231 - 15271 mRNA_6903 0.40 -0.1
394,278 + 15271 mRNA_6903 0.44 -2.8
394,980 - -1.3
395,167 + -2.4
395,438 + 15272 mRNA_6904 0.15 -2.6
395,565 - 15272 mRNA_6904 0.22 -2.7
395,578 + 15272 mRNA_6904 0.23 0.0
396,030 + 15272 mRNA_6904 0.50 1.1
396,200 + 15272 mRNA_6904 0.60 -1.2
396,305 + 15272 mRNA_6904 0.66 -1.3
396,411 + 15272 mRNA_6904 0.72 -1.6
396,436 + 15272 mRNA_6904 0.74 -0.4
396,855 - -0.3
396,893 - -2.3
396,903 - -1.7
396,910 + -3.7
396,917 + -2.6
396,921 - -0.4
396,928 + -0.1
396,943 - -1.5
397,050 - -1.4
397,082 + -1.5
397,203 + -2.5
397,223 + -0.8
397,773 - 15273 mRNA_6905 0.13 0.2