Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6902

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390201 to 390814 15269 mRNA_6902: 15270 - HMMPfam-Fungal family of unknown function (DUF1776)-PF08643,SUPERFAMILY--SSF51735, at 390939 to 393309 15270 mRNA_6903: 15271 - Hypothetical Protein, at 393744 to 394954 15271

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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390,042 - -0.8
390,132 - -1.0
390,446 - 15269 mRNA_6901 0.40 -0.3
390,898 + -1.1
391,043 + -0.7
391,048 - -1.7
391,230 - 15270 mRNA_6902 0.12 -1.7
391,309 - 15270 mRNA_6902 0.16 -0.0
391,328 - 15270 mRNA_6902 0.16 -0.6
391,484 + 15270 mRNA_6902 0.23 0.6
391,807 + 15270 mRNA_6902 0.37 0.2
392,931 + 15270 mRNA_6902 0.84 1.0
393,188 - -1.1
393,402 - -1.3
393,490 + -3.2
393,510 - -0.7
393,655 - -1.2
393,811 - -1.1
393,934 + 15271 mRNA_6903 0.16 -2.1
394,192 - 15271 mRNA_6903 0.37 0.7
394,231 - 15271 mRNA_6903 0.40 -0.1
394,278 + 15271 mRNA_6903 0.44 -2.8