Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6896

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6896: 15264 - KOG1399 Flavin-containing monooxygenase, at 380305 to 381908 15264 mRNA_6897: 15265 - Hypothetical Protein, at 382529 to 383336 15265

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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379,476 - 0.7
379,480 - -2.0
379,488 - -2.1
379,488 + -1.0
379,497 + -0.8
379,778 - -1.5
379,810 - -3.7
379,934 - 0.4
380,242 - -1.1
380,492 - 15264 mRNA_6896 0.12 -1.2
380,526 + 15264 mRNA_6896 0.14 -1.2
380,863 - 15264 mRNA_6896 0.35 -1.5
380,990 - 15264 mRNA_6896 0.43 -1.5
381,402 + 15264 mRNA_6896 0.68 -2.1
381,603 + 15264 mRNA_6896 0.81 -1.5
381,697 - 15264 mRNA_6896 0.87 -1.6
381,702 - 15264 mRNA_6896 0.87 -1.6
382,017 + -0.1
382,147 + -1.4
382,149 - -2.4
382,181 - -2.7
382,188 - -0.0
382,196 + -0.3
382,221 + -1.5
382,237 + -0.9
382,238 - -0.5
382,238 - -2.8
382,243 + -1.9
382,251 + -1.2
382,261 + -5.3
382,261 - -2.1
382,264 + -1.8
382,264 - -2.6
382,268 + -0.4
382,269 + -0.5
382,270 + -2.7
382,272 + -2.8
382,277 - -1.8
382,295 + -1.1
382,306 - 1.2
382,309 + -0.0
382,310 - -0.1
382,311 - -0.9
382,325 - -3.6
382,337 + -1.3
382,339 + -3.6
382,340 + -1.1
382,342 - 0.9
382,344 + 0.2
382,351 + -2.2
382,379 + 0.0
382,471 + -2.6
382,490 + -3.3
382,494 + -3.4
382,499 - -0.6
382,508 + -0.6
382,512 + -2.1
382,513 + -0.4
382,535 + -2.2
382,652 - 15265 mRNA_6897 0.15 -1.1
382,662 + 15265 mRNA_6897 0.16 -2.3
382,662 + 15265 mRNA_6897 0.16 -2.4
382,769 - 15265 mRNA_6897 0.30 0.4