Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6834

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6833: 15201 - HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801, at 231692 to 232700 15201 mRNA_6834: 15202 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 233665 to 235762 15202 mRNA_6835: 15203 - Hypothetical Protein, at 236231 to 236767 15203

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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232,680 - -1.2
232,831 - -0.6
232,964 - 1.6
233,152 - -1.7
233,304 + -0.4
233,411 + -2.2
233,442 - -1.8
233,464 + -0.5
233,485 - -3.6
233,513 + -1.9
233,534 - -1.1
233,722 - -1.9
233,742 + -2.1
233,742 + -1.7
233,906 - 15202 mRNA_6834 0.11 -0.1
234,045 - 15202 mRNA_6834 0.18 -1.6
234,048 + 15202 mRNA_6834 0.18 -0.6
234,354 + 15202 mRNA_6834 0.33 0.3
234,884 - 15202 mRNA_6834 0.58 -2.0
234,889 + 15202 mRNA_6834 0.58 -1.6
234,907 - 15202 mRNA_6834 0.59 -3.0
234,908 + 15202 mRNA_6834 0.59 -0.3
235,152 - 15202 mRNA_6834 0.71 -1.9
235,208 - 15202 mRNA_6834 0.74 -0.0
235,213 + 15202 mRNA_6834 0.74 -1.8
235,217 + 15202 mRNA_6834 0.74 0.3
235,217 + 15202 mRNA_6834 0.74 -0.7
235,482 - 15202 mRNA_6834 0.87 -1.2
235,496 - 15202 mRNA_6834 0.87 -2.8
235,612 - -0.5
235,793 - -0.7
236,026 + -3.1
236,086 + -0.1
236,202 + -1.2
236,224 - 0.1
236,267 + -0.8
236,397 - 15203 mRNA_6835 0.31 1.7
236,526 - 15203 mRNA_6835 0.55 -2.4
236,604 + 15203 mRNA_6835 0.69 0.1
236,621 + 15203 mRNA_6835 0.73 -0.8
236,621 + 15203 mRNA_6835 0.73 -0.9
236,629 + 15203 mRNA_6835 0.74 -2.1
236,636 + 15203 mRNA_6835 0.75 -1.6
236,687 - 15203 mRNA_6835 0.85 -0.8
236,694 + 15203 mRNA_6835 0.86 -1.8
236,710 - 15203 mRNA_6835 0.89 -2.7