Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6833

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6832: 15200 - K18158 NCA2 nuclear control of ATPase protein 2, at 229712 to 231545 15200 mRNA_6833: 15201 - HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801, at 231692 to 232700 15201 mRNA_6834: 15202 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 233665 to 235762 15202

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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230,895 - 15200 mRNA_6832 0.65 -2.0
231,024 - 15200 mRNA_6832 0.72 0.7
231,058 - 15200 mRNA_6832 0.73 -5.0
231,192 - 15200 mRNA_6832 0.81 -0.4
231,238 + 15200 mRNA_6832 0.83 -0.2
231,350 + 15200 mRNA_6832 0.89 0.5
231,471 + -0.1
231,471 - -0.5
231,499 - 1.9
231,515 + -2.3
231,622 - -0.8
231,632 + -0.0
231,659 + -1.3
231,674 + -1.6
231,775 - -0.6
231,783 - -1.9
231,792 + -3.3
231,795 + 15201 mRNA_6833 0.10 -2.1
231,815 - 15201 mRNA_6833 0.12 -0.8
231,815 + 15201 mRNA_6833 0.12 -0.4
231,930 - 15201 mRNA_6833 0.24 -1.5
231,931 - 15201 mRNA_6833 0.24 -0.1
231,937 - 15201 mRNA_6833 0.24 -2.2
231,955 + 15201 mRNA_6833 0.26 0.6
231,962 - 15201 mRNA_6833 0.27 -1.3
232,047 + 15201 mRNA_6833 0.35 -2.8
232,513 + 15201 mRNA_6833 0.81 -2.4
232,680 - -1.2
232,831 - -0.6
232,964 - 1.6
233,152 - -1.7
233,304 + -0.4
233,411 + -2.2
233,442 - -1.8
233,464 + -0.5
233,485 - -3.6
233,513 + -1.9
233,534 - -1.1