Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6817

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6816: 15184 - K02437 gcvH, GCSH glycine cleavage system H protein, at 202088 to 202810 15184 mRNA_6817: 15185 - KOG3525 Subtilisin-like proprotein convertase, at 203064 to 206112 15185 mRNA_6818: 15186 - KOG0729 26S proteasome regulatory complex, ATPase RPT1, at 206564 to 206841 15186 mRNA_6819: 15187 - SUPERFAMILY--SSF103107, at 207013 to 207504 15187

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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202,851 + -3.5
202,859 - -1.5
202,865 + -1.1
202,866 - -3.8
202,876 - -0.6
202,888 - -3.0
202,902 + -0.2
202,919 + -0.2
202,924 - -0.9
203,045 - -1.0
203,070 - 0.0
203,744 + 15185 mRNA_6817 0.22 -3.6
203,744 + 15185 mRNA_6817 0.22 -2.3
204,022 + 15185 mRNA_6817 0.31 -0.6
204,138 - 15185 mRNA_6817 0.35 -2.9
204,293 - 15185 mRNA_6817 0.40 -0.6
204,373 + 15185 mRNA_6817 0.43 -1.2
204,646 + 15185 mRNA_6817 0.52 -1.0
204,775 + 15185 mRNA_6817 0.56 -0.5
204,776 + 15185 mRNA_6817 0.56 -0.5
204,891 - 15185 mRNA_6817 0.60 -1.9
205,064 - 15185 mRNA_6817 0.66 -1.1
205,172 - 15185 mRNA_6817 0.69 -1.4
205,334 - 15185 mRNA_6817 0.74 -1.4
205,417 + 15185 mRNA_6817 0.77 -0.1
205,483 - 15185 mRNA_6817 0.79 0.6
205,590 - 15185 mRNA_6817 0.83 -0.4
205,870 + -2.9
206,044 - -0.2
206,810 + 15186 mRNA_6818 0.88 -2.4