Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6814

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198108 to 198984 15181 mRNA_6814: 15182 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 199925 to 200316 15182 mRNA_6815: 15183 - HMMPfam-PUB domain-PF09409,SUPERFAMILY--SSF143503, at 200696 to 201916 15183

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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199,041 - -3.2
199,060 + -0.3
199,143 + 0.7
199,220 - -1.2
199,334 - -1.2
199,338 + -2.7
199,364 - 1.0
199,713 + -0.1
200,212 + 15182 mRNA_6814 0.73 -0.5
200,213 + 15182 mRNA_6814 0.73 -0.2
200,227 + 15182 mRNA_6814 0.77 -0.4
200,227 + 15182 mRNA_6814 0.77 -3.7
200,408 + -1.0
200,539 + -0.5
200,681 + -1.2
200,821 - 15183 mRNA_6815 0.10 -0.4
201,087 + 15183 mRNA_6815 0.32 0.9
201,095 - 15183 mRNA_6815 0.33 0.6
201,116 - 15183 mRNA_6815 0.34 -1.8
201,195 - 15183 mRNA_6815 0.41 -1.2